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sotv exostosin glycosyltransferase sotv [ Cryptotermes secundus ]

Gene ID: 111872464, updated on 22-May-2024

Summary

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Gene symbol
sotv
Gene description
exostosin glycosyltransferase sotv
Locus tag
B7P43_G08492
See related
EnsemblRapid:LOC111872464
Gene type
protein coding
RefSeq status
MODEL
Organism
Cryptotermes secundus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea; Blattoidea; Termitoidae; Kalotermitidae; Cryptotermitinae; Cryptotermes
Also known as
EXT2_1
Orthologs
fruit fly all
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Genomic context

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See sotv in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Csec_1.0 (GCF_002891405.2) Unplaced Scaffold NW_019740659.1 (630860..649788, complement)

NW_019740659.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein CCDC198-like Neighboring gene serum response factor blistered Neighboring gene uncharacterized LOC111872455 Neighboring gene protein Aster-B Neighboring gene ribosomal protein S27A Neighboring gene NSA2 ribosome biogenesis factor-like IP259 Neighboring gene uncharacterized LOC111872459

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019740659 Unplaced Scaffold Reference Csec_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cryptotermes secundus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Csec_1.0

Genomic

  1. NW_019740659.1 Reference Csec_1.0

    Range
    630860..649788 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023866414.2 → XP_023722182.1  exostosin-2

    UniProtKB/TrEMBL
    A0A2J7PQE6
    Related
    XP_023722182.1, XM_023866414.2
    Conserved Domains (2) summary
    pfam03016
    Location:98 → 374
    Exostosin; Exostosin family
    pfam09258
    Location:448 → 689
    Glyco_transf_64; Glycosyl transferase family 64 domain

  2. XM_033754710.1 → XP_033610601.1  exostosin-2

    UniProtKB/TrEMBL
    A0A2J7PQE6
    Related
    XP_033610601.1, XM_033754710.1
    Conserved Domains (2) summary
    pfam03016
    Location:98 → 374
    Exostosin; Exostosin family
    pfam09258
    Location:448 → 689
    Glyco_transf_64; Glycosyl transferase family 64 domain

  3. XM_023866411.2 → XP_023722179.1  exostosin-2

    UniProtKB/TrEMBL
    A0A2J7PQE6
    Related
    XP_023722179.1, XM_023866411.2
    Conserved Domains (2) summary
    pfam03016
    Location:98 → 374
    Exostosin; Exostosin family
    pfam09258
    Location:448 → 689
    Glyco_transf_64; Glycosyl transferase family 64 domain
Nucleotide Protein
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