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rt Protein O-mannosyltransferase rt [ Cryptotermes secundus ]

Gene ID: 111870428, updated on 22-May-2024

Summary

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Gene symbol
rt
Gene description
Protein O-mannosyltransferase rt
Locus tag
B7P43_G15068
See related
EnsemblRapid:LOC111870428
Gene type
protein coding
RefSeq status
MODEL
Organism
Cryptotermes secundus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea; Blattoidea; Termitoidae; Kalotermitidae; Cryptotermitinae; Cryptotermes
Annotation information
Annotation category: partial on reference assembly
Orthologs
fruit fly all
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Genomic context

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Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
101 current Csec_1.0 (GCF_002891405.2) Unplaced Scaffold NW_019737416.1 (205280..271602)

NW_019737416.1Genomic Context describing neighboring genes Neighboring gene RNA guanine-7 methyltransferase Neighboring gene DNA topoisomerase I, mitochondrial Neighboring gene ATPase WRNIP1 Neighboring gene charged multivesicular body protein 6-B Neighboring gene Proteasome beta2 subunit

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019737416 Unplaced Scaffold Reference Csec_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cryptotermes secundus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Csec_1.0

Genomic

  1. NW_019737416.1 Reference Csec_1.0

    Range
    205280..271602
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023862728.2 → XP_023718496.1  protein O-mannosyltransferase 1

    UniProtKB/TrEMBL
    A0A2J7Q1P0
    Related
    XP_023718496.1, XM_023862728.2
Nucleotide Protein
Heading Accession and Version

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