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Tps1 Trehalose-6-phosphate synthase 1 [ Cryptotermes secundus ]

Gene ID: 111865304, updated on 23-May-2024

Summary

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Gene symbol
Tps1
Gene description
Trehalose-6-phosphate synthase 1
Locus tag
B7P43_G17687
See related
EnsemblRapid:LOC111865304
Gene type
protein coding
RefSeq status
MODEL
Organism
Cryptotermes secundus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Dictyoptera; Blattodea; Blattoidea; Termitoidae; Kalotermitidae; Cryptotermitinae; Cryptotermes
Annotation information
Annotation category: partial on reference assembly
Orthologs
fruit fly all
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Genomic context

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See Tps1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Csec_1.0 (GCF_002891405.2) Unplaced Scaffold NW_019728573.1 (173..15348)

NW_019728573.1Genomic Context describing neighboring genes Neighboring gene phosphatidylinositol 3-kinase regulatory subunit gamma

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019728573 Unplaced Scaffold Reference Csec_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in trehalose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in trehalose metabolism in response to stress IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of alpha,alpha-trehalose-phosphate synthase complex (UDP-forming) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Names
alpha,alpha-trehalose-phosphate synthase
probable trehalose-phosphate phosphatase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cryptotermes secundus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Csec_1.0

Genomic

  1. NW_019728573.1 Reference Csec_1.0

    Range
    173..15348
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023853207.2 → XP_023708975.2  alpha,alpha-trehalose-phosphate synthase [UDP-forming] isoform X1

    Related
    XP_023708975.2, XM_023853207.2
    Conserved Domains (1) summary
    PRK14501
    Location:12 → 762
    PRK14501; putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

  2. XM_023853208.2 → XP_023708976.2  alpha,alpha-trehalose-phosphate synthase [UDP-forming] isoform X2

    Related
    XP_023708976.2, XM_023853208.2
    Conserved Domains (1) summary
    PRK14501
    Location:12 → 762
    PRK14501; putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional

RNA

  1. XR_002842964.2 RNA Sequence

    Related
    XR_002842964.2

  2. XR_004513119.1 RNA Sequence

    Related
    XR_004513119.1
Nucleotide Protein
Heading Accession and Version

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