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cars2 cysteinyl-tRNA synthetase 2, mitochondrial [ Paramormyrops kingsleyae ]

Gene ID: 111851544, updated on 15-Mar-2024

Summary

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Gene symbol
cars2
Gene description
cysteinyl-tRNA synthetase 2, mitochondrial
See related
Ensembl:ENSPKIG00000009618
Gene type
protein coding
RefSeq status
MODEL
Organism
Paramormyrops kingsleyae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Mormyridae; Paramormyrops
Orthologs
human zebrafish all
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Genomic context

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See cars2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current PKINGS_0.1 (GCF_002872115.1) Unplaced Scaffold NW_019711564.1 (5342939..5349142)

NW_019711564.1Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme E2 A, like Neighboring gene inhibitor of growth family, member 1 Neighboring gene NAD(P)HX dehydratase Neighboring gene RAB20, member RAS oncogene family Neighboring gene collagen, type IV, alpha 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019711564 Unplaced Scaffold Reference PKINGS_0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cysteinyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable cysteine--tRNA ligase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paramormyrops kingsleyae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PKINGS_0.1

Genomic

  1. NW_019711564.1 Reference PKINGS_0.1

    Range
    5342939..5349142
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023826609.1 → XP_023682377.1  probable cysteine--tRNA ligase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A3B3SA94

  2. XM_023826681.1 → XP_023682449.1  probable cysteine--tRNA ligase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A3B3SA55, A0A3B3SA94
    Related
    ENSPKIP00000027627.1, ENSPKIT00000008397.1
Nucleotide Protein
Heading Accession and Version

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