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LOC111840117 torsin-1A-interacting protein 2-like [ Paramormyrops kingsleyae ]

Gene ID: 111840117, updated on 9-Nov-2023

Summary

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Gene symbol
LOC111840117
Gene description
torsin-1A-interacting protein 2-like
See related
Ensembl:ENSPKIG00000007685
Gene type
protein coding
RefSeq status
MODEL
Organism
Paramormyrops kingsleyae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Mormyridae; Paramormyrops
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Genomic context

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See LOC111840117 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current PKINGS_0.1 (GCF_002872115.1) Unplaced Scaffold NW_019715954.1 (1051312..1060236)

NW_019715954.1Genomic Context describing neighboring genes Neighboring gene olfactomedin-like 2Ba Neighboring gene torsin-1A-interacting protein 2-like Neighboring gene putative ferric-chelate reductase 1 Neighboring gene putative ferric-chelate reductase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019715954 Unplaced Scaffold Reference PKINGS_0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paramormyrops kingsleyae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PKINGS_0.1

Genomic

  1. NW_019715954.1 Reference PKINGS_0.1

    Range
    1051312..1060236
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023804609.1 → XP_023660377.1  torsin-1A-interacting protein 2-like isoform X4

    UniProtKB/TrEMBL
    A0A3B3S2R6

  2. XM_023804606.1 → XP_023660374.1  torsin-1A-interacting protein 2-like isoform X1

    UniProtKB/TrEMBL
    A0A3B3S162

  3. XM_023804607.1 → XP_023660375.1  torsin-1A-interacting protein 2-like isoform X2

    UniProtKB/TrEMBL
    A0A3B3S137, A0A3B3S162
    Related
    ENSPKIP00000024439.1, ENSPKIT00000005146.1

  4. XM_023804608.1 → XP_023660376.1  torsin-1A-interacting protein 2-like isoform X3

    UniProtKB/TrEMBL
    A0A3B3S162
Nucleotide Protein
Heading Accession and Version

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