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prpf6 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [ Paramormyrops kingsleyae ]

Gene ID: 111835958, updated on 15-Mar-2024

Summary

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Gene symbol
prpf6
Gene description
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)
See related
Ensembl:ENSPKIG00000005627
Gene type
protein coding
RefSeq status
MODEL
Organism
Paramormyrops kingsleyae
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala; Osteoglossomorpha; Osteoglossiformes; Mormyridae; Paramormyrops
Orthologs
human zebrafish all
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Genomic context

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See prpf6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
100 current PKINGS_0.1 (GCF_002872115.1) Unplaced Scaffold NW_019715721.1 (2126029..2136656)

NW_019715721.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain-containing protein 46-like Neighboring gene zinc finger protein 512B-like Neighboring gene beta-1,4-galactosyltransferase 5-like Neighboring gene visual pigment-like receptor peropsin

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019715721 Unplaced Scaffold Reference PKINGS_0.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spliceosomal tri-snRNP complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U4/U6 x U5 tri-snRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of catalytic step 2 spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pre-mRNA-processing factor 6
Names
pre-mRNA processing factor 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Paramormyrops kingsleyae Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PKINGS_0.1

Genomic

  1. NW_019715721.1 Reference PKINGS_0.1

    Range
    2126029..2136656
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023796800.1 → XP_023652568.1  pre-mRNA-processing factor 6

    UniProtKB/TrEMBL
    A0A3B3RRH8
    Related
    ENSPKIP00000021172.1, ENSPKIT00000001801.1
Nucleotide Protein
Heading Accession and Version

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