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LOC111805966 F-box protein GID2-like [ Cucurbita pepo subsp. pepo (vegetable marrow) ]

Gene ID: 111805966, updated on 21-Dec-2023

Summary

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Gene symbol
LOC111805966
Gene description
F-box protein GID2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucurbita pepo subsp. pepo (sub-species: pepo)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Genomic context

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See LOC111805966 in Genome Data Viewer
Location:
chromosome: LG11
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ASM280686v2 (GCF_002806865.1) LG11 NC_036648.1 (732895..733698)

Chromosome LG11 - NC_036648.1Genomic Context describing neighboring genes Neighboring gene putative cyclin-A3-1 Neighboring gene MFP1 attachment factor 1-like Neighboring gene transcription factor MYB44-like Neighboring gene cyclin-D3-3-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036648.1 Chromosome LG11 Reference ASM280686v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box protein GID2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucurbita pepo subsp. pepo Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM280686v2 Primary Assembly

Genomic

  1. NC_036648.1 Reference ASM280686v2 Primary Assembly

    Range
    732895..733698
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023691277.1 → XP_023547045.1  F-box protein GID2-like

    Conserved Domains (1) summary
    pfam12937
    Location:22 → 66
    F-box-like
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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