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LOC111800284 sulfoquinovosyl transferase SQD2-like [ Cucurbita pepo subsp. pepo (vegetable marrow) ]

Gene ID: 111800284, updated on 21-Dec-2023

Summary

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Gene symbol
LOC111800284
Gene description
sulfoquinovosyl transferase SQD2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucurbita pepo subsp. pepo (sub-species: pepo)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Genomic context

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See LOC111800284 in Genome Data Viewer
Location:
chromosome: LG08
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ASM280686v2 (GCF_002806865.1) LG08 NC_036645.1 (8856415..8861052, complement)

Chromosome LG08 - NC_036645.1Genomic Context describing neighboring genes Neighboring gene transcription factor DIVARICATA-like Neighboring gene uncharacterized acetyltransferase At3g50280-like Neighboring gene uncharacterized LOC111800287 Neighboring gene uncharacterized LOC111800185

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036645.1 Chromosome LG08 Reference ASM280686v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-sulfoquinovose:DAG sulfoquinovosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sulfolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sulfoquinovosyl transferase SQD2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucurbita pepo subsp. pepo Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM280686v2 Primary Assembly

Genomic

  1. NC_036645.1 Reference ASM280686v2 Primary Assembly

    Range
    8856415..8861052 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023683904.1 → XP_023539672.1  sulfoquinovosyl transferase SQD2-like

    Conserved Domains (1) summary
    PLN02871
    Location:1 → 430
    PLN02871; UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Nucleotide Protein
Heading Accession and Version

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