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LOC111787801 mitochondrial arginine transporter BAC2-like [ Cucurbita pepo subsp. pepo (vegetable marrow) ]

Gene ID: 111787801, updated on 21-Dec-2023

Summary

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Gene symbol
LOC111787801
Gene description
mitochondrial arginine transporter BAC2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucurbita pepo subsp. pepo (sub-species: pepo)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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See LOC111787801 in Genome Data Viewer
Location:
chromosome: LG02
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ASM280686v2 (GCF_002806865.1) LG02 NC_036639.1 (13881749..13882922)

Chromosome LG02 - NC_036639.1Genomic Context describing neighboring genes Neighboring gene nitrate regulatory gene2 protein-like Neighboring gene uncharacterized LOC111787802 Neighboring gene 60S ribosomal protein L37-3-like Neighboring gene uncharacterized LOC111787807

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036639.1 Chromosome LG02 Reference ASM280686v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial arginine transporter BAC2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucurbita pepo subsp. pepo Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM280686v2 Primary Assembly

Genomic

  1. NC_036639.1 Reference ASM280686v2 Primary Assembly

    Range
    13881749..13882922
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023667855.1 → XP_023523623.1  mitochondrial arginine transporter BAC2-like

    Conserved Domains (2) summary
    pfam00153
    Location:214 → 301
    Mito_carr; Mitochondrial carrier protein
    cl28162
    Location:31 → 83
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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