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EXOSC6 exosome component 6 [ Equus caballus (horse) ]

Gene ID: 111772793, updated on 14-Aug-2024

Summary

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Gene symbol
EXOSC6
Gene description
exosome component 6
See related
Ensembl:ENSECAG00000039860
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See EXOSC6 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 3 NC_009146.3 (24045088..24047529)

Chromosome 3 - NC_009146.3Genomic Context describing neighboring genes Neighboring gene ATP-dependent RNA helicase DDX19A Neighboring gene ATP-dependent RNA helicase DDX19B Neighboring gene alanyl-tRNA synthetase 1 Neighboring gene heterogeneous nuclear ribonucleoprotein C-like Neighboring gene transfer RNA glycine (anticodon GCC) Neighboring gene C-type lectin domain family 18 member A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009146.3 Chromosome 3 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in U4 snRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear mRNA surveillance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in poly(A)-dependent snoRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytoplasmic exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nuclear exosome (RNase complex) IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exosome complex component MTR3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009146.3 Reference EquCab3.0 Primary Assembly

    Range
    24045088..24047529
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023637318.1 → XP_023493086.1  exosome complex component MTR3

    UniProtKB/TrEMBL
    A0A3Q2L3S5
    Related
    ENSECAP00000032558.1, ENSECAT00000057141.2
    Conserved Domains (1) summary
    cd11371
    Location:36 → 260
    RNase_PH_MTR3; MTR3 subunit of eukaryotic exosome
Nucleotide Protein
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