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SFT2D3 SFT2 domain containing 3 [ Equus caballus (horse) ]

Gene ID: 111768862, updated on 17-Aug-2024

Summary

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Official Symbol
SFT2D3provided by VGNC
Official Full Name
SFT2 domain containing 3provided by VGNC
Primary source
VGNC:VGNC:112327
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human mouse all
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Genomic context

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See SFT2D3 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 18 NC_009161.3 (3116635..3119575, complement)

Chromosome 18 - NC_009161.3Genomic Context describing neighboring genes Neighboring gene RNA polymerase II subunit D Neighboring gene WD repeat domain 33 Neighboring gene LIM zinc finger domain containing 2 Neighboring gene G protein-coupled receptor 17 Neighboring gene myosin VIIB

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009161.3 Chromosome 18 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
vesicle transport protein SFT2C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009161.3 Reference EquCab3.0 Primary Assembly

    Range
    3116635..3119575 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023622653.1 → XP_023478421.1  vesicle transport protein SFT2C

    Conserved Domains (1) summary
    pfam04178
    Location:149 → 180
    Got1; Got1/Sft2-like family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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