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LOC111767642 heparan sulfate glucosamine 3-O-sulfotransferase 4 [ Equus caballus (horse) ]

Gene ID: 111767642, updated on 14-Aug-2024

Summary

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Gene symbol
LOC111767642
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
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Genomic context

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See LOC111767642 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 13 NC_009156.3 (22795746..22801051, complement)

Chromosome 13 - NC_009156.3Genomic Context describing neighboring genes Neighboring gene histone H1oo pseudogene Neighboring gene ER degradation-enhancing alpha-mannosidase-like protein 1 Neighboring gene heparan sulfate glucosamine 3-O-sulfotransferase 4-like Neighboring gene leucine carboxyl methyltransferase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009156.3 Chromosome 13 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009156.3 Reference EquCab3.0 Primary Assembly

    Range
    22795746..22801051 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023616882.1 → XP_023472650.1  heparan sulfate glucosamine 3-O-sulfotransferase 4

    Conserved Domains (1) summary
    pfam00685
    Location:115 → 272
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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