U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CAPN15 calpain 15 [ Equus caballus (horse) ]

Gene ID: 111767599, updated on 17-Aug-2024

Summary

Official Symbol
CAPN15provided by VGNC
Official Full Name
calpain 15provided by VGNC
Primary source
VGNC:VGNC:58135
See related
Ensembl:ENSECAG00000011148
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See CAPN15 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 13 NC_009156.3 (43283432..43309089, complement)

Chromosome 13 - NC_009156.3Genomic Context describing neighboring genes Neighboring gene NHL repeat containing 4 Neighboring gene proline rich 35 Neighboring gene microRNA mir-9140 Neighboring gene RAB11 family interacting protein 3 Neighboring gene 2,4-dienoyl-CoA reductase 2

Genomic regions, transcripts, and products

Genomic Sequence:
NC_009156.3 Chromosome 13 Reference EquCab3.0 Primary Assembly

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium-dependent cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009156.3 Reference EquCab3.0 Primary Assembly

    Range
    43283432..43309089 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023616739.1XP_023472507.1  calpain-15 isoform X5

    UniProtKB/TrEMBL
    A0A9L0RET8
    Related
    ENSECAP00000060170.1, ENSECAT00000087306.1
    Conserved Domains (5) summary
    smart00547
    Location:407431
    ZnF_RBZ; Zinc finger domain
    cd00044
    Location:469784
    CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
    sd00025
    Location:217238
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    sd00029
    Location:345364
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    cl26464
    Location:151310
    Atrophin-1; Atrophin-1 family
  2. XM_023616742.1XP_023472510.1  calpain-15 isoform X5

    UniProtKB/TrEMBL
    A0A9L0RET8
    Conserved Domains (5) summary
    smart00547
    Location:407431
    ZnF_RBZ; Zinc finger domain
    cd00044
    Location:469784
    CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
    sd00025
    Location:217238
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    sd00029
    Location:345364
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    cl26464
    Location:151310
    Atrophin-1; Atrophin-1 family
  3. XM_023616736.1XP_023472504.1  calpain-15 isoform X2

    UniProtKB/TrEMBL
    A0A9L0RET8
    Related
    ENSECAP00000061983.1, ENSECAT00000088019.1
    Conserved Domains (5) summary
    smart00547
    Location:475499
    ZnF_RBZ; Zinc finger domain
    cd00044
    Location:537852
    CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
    sd00025
    Location:285306
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    sd00029
    Location:413432
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    cl26464
    Location:219378
    Atrophin-1; Atrophin-1 family
  4. XM_023616735.1XP_023472503.1  calpain-15 isoform X1

    UniProtKB/TrEMBL
    A0A9L0RET8, F6ZTC0
    Related
    ENSECAP00000009041.3, ENSECAT00000011554.3
    Conserved Domains (5) summary
    smart00547
    Location:475499
    ZnF_RBZ; Zinc finger domain
    cd00044
    Location:537852
    CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
    sd00025
    Location:285306
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    sd00029
    Location:413432
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    cl26464
    Location:219378
    Atrophin-1; Atrophin-1 family
  5. XM_023616741.1XP_023472509.1  calpain-15 isoform X5

    UniProtKB/TrEMBL
    A0A9L0RET8
    Conserved Domains (5) summary
    smart00547
    Location:407431
    ZnF_RBZ; Zinc finger domain
    cd00044
    Location:469784
    CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
    sd00025
    Location:217238
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    sd00029
    Location:345364
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    cl26464
    Location:151310
    Atrophin-1; Atrophin-1 family
  6. XM_023616737.1XP_023472505.1  calpain-15 isoform X3

    UniProtKB/TrEMBL
    A0A9L0RET8
    Conserved Domains (5) summary
    smart00547
    Location:475499
    ZnF_RBZ; Zinc finger domain
    cd00044
    Location:537852
    CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
    sd00025
    Location:285306
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    sd00029
    Location:413432
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    cl26464
    Location:219378
    Atrophin-1; Atrophin-1 family
  7. XM_023616738.1XP_023472506.1  calpain-15 isoform X4

    UniProtKB/TrEMBL
    A0A9L0RET8
    Conserved Domains (5) summary
    smart00547
    Location:475499
    ZnF_RBZ; Zinc finger domain
    cd00044
    Location:537852
    CysPc; Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
    sd00025
    Location:285306
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    sd00029
    Location:413432
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    cl26464
    Location:219378
    Atrophin-1; Atrophin-1 family