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GCNT3 glucosaminyl (N-acetyl) transferase 3, mucin type [ Sarcophilus harrisii (Tasmanian devil) ]

Gene ID: 111718498, updated on 15-Mar-2024

Summary

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Gene symbol
GCNT3
Gene description
glucosaminyl (N-acetyl) transferase 3, mucin type
See related
Ensembl:ENSSHAG00000011674
Gene type
protein coding
RefSeq status
MODEL
Organism
Sarcophilus harrisii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Sarcophilus
Orthologs
human mouse all
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Genomic context

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See GCNT3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
103 current mSarHar1.11 (GCF_902635505.1) 2 NC_045427.1 (526983691..526986296, complement)
102 previous assembly Devil_ref v7.0 (GCF_000189315.1) 1 Unlocalized Scaffold NW_003816493.1 (887008..889600)

Chromosome 2 - NC_045427.1Genomic Context describing neighboring genes Neighboring gene BCL2 interacting protein 2 Neighboring gene general transcription factor IIA subunit 2 Neighboring gene OTU deubiquitinase 7A Neighboring gene KLF transcription factor 13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sarcophilus harrisii Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSarHar1.11 Primary Assembly

Genomic

  1. NC_045427.1 Reference mSarHar1.11 Primary Assembly

    Range
    526983691..526986296 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012542942.3 → XP_012398396.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3

    UniProtKB/TrEMBL
    A0A7N4NS78, G3WE05
    Related
    ENSSHAP00000027684.1, ENSSHAT00000041268.1
    Conserved Domains (1) summary
    pfam02485
    Location:134 → 401
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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