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LOC111717275 mitochondrial basic amino acids transporter [ Eurytemora carolleeae ]

Gene ID: 111717275, updated on 17-Oct-2024

Summary

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Gene symbol
LOC111717275
Gene description
mitochondrial basic amino acids transporter
See related
EnsemblRapid:LOC111717275
Gene type
protein coding
RefSeq status
MODEL
Organism
Eurytemora carolleeae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Hexanauplia; Copepoda; Calanoida; Temoridae; Eurytemora
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Genomic context

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See LOC111717275 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_10 current Eaff_2.0 (GCF_000591075.1) Unplaced Scaffold NW_019396082.1 (362554..370806)

NW_019396082.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111717370 Neighboring gene Transcriptional coactivator yki Neighboring gene uncharacterized LOC111717342 Neighboring gene uncharacterized LOC111717350

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019396082 Unplaced Scaffold Reference Eaff_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial basic amino acids transporter; mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000591075.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eaff_2.0

Genomic

  1. NW_019396082.1 Reference Eaff_2.0

    Range
    362554..370806
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023492788.1 → XP_023348556.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X2

    Related
    XP_023348556.1, XM_023492788.1
    Conserved Domains (1) summary
    cl28162
    Location:15 → 72
    Mito_carr; Mitochondrial carrier protein

  2. XM_023492782.1 → XP_023348550.1  mitochondrial basic amino acids transporter isoform X1

    Related
    XP_023348550.1, XM_023492782.1
    Conserved Domains (1) summary
    pfam00153
    Location:1 → 82
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
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