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LOC111704320 carotenoid isomerooxygenase [ Eurytemora carolleeae ]

Gene ID: 111704320, updated on 17-Oct-2024

Summary

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Gene symbol
LOC111704320
Gene description
carotenoid isomerooxygenase
See related
EnsemblRapid:LOC111704320
Gene type
protein coding
RefSeq status
MODEL
Organism
Eurytemora carolleeae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Hexanauplia; Copepoda; Calanoida; Temoridae; Eurytemora
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Genomic context

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See LOC111704320 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_10 current Eaff_2.0 (GCF_000591075.1) Unplaced Scaffold NW_019396494.1 (166224..176591)

NW_019396494.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111704322 Neighboring gene uncharacterized LOC111704325 Neighboring gene glutamate synthase 1 [NADH], chloroplastic Neighboring gene uncharacterized LOC111704321 Neighboring gene ephrin-B2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019396494 Unplaced Scaffold Reference Eaff_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-carotene 15,15'-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carotenoid dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carotene catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retinal metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carotenoid isomerooxygenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000591075.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eaff_2.0

Genomic

  1. NW_019396494.1 Reference Eaff_2.0

    Range
    166224..176591
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023476535.1 → XP_023332303.1  carotenoid isomerooxygenase

    Related
    XP_023332303.1, XM_023476535.1
    Conserved Domains (1) summary
    pfam03055
    Location:48 → 555
    RPE65; Retinal pigment epithelial membrane protein
Nucleotide Protein
Heading Accession and Version

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