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LOC111696849 putative uncharacterized protein DDB_G0271606 [ Eurytemora carolleeae ]

Gene ID: 111696849, updated on 17-Oct-2024

Summary

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Gene symbol
LOC111696849
Gene description
putative uncharacterized protein DDB_G0271606
See related
EnsemblRapid:LOC111696849
Gene type
protein coding
RefSeq status
MODEL
Organism
Eurytemora carolleeae
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Hexanauplia; Copepoda; Calanoida; Temoridae; Eurytemora
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Genomic context

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See LOC111696849 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2023_10 current Eaff_2.0 (GCF_000591075.1) Unplaced Scaffold NW_019396161.1 (132710..153842, complement)

NW_019396161.1Genomic Context describing neighboring genes Neighboring gene trigger factor Neighboring gene uncharacterized LOC111696838 Neighboring gene actin-binding protein IPP Neighboring gene progesterone-induced-blocking factor 1 Neighboring gene Ras converting CAAX endopeptidase Sras

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019396161 Unplaced Scaffold Reference Eaff_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative uncharacterized protein DDB_G0271606

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000591075.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Eaff_2.0

Genomic

  1. NW_019396161.1 Reference Eaff_2.0

    Range
    132710..153842 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023466598.1 → XP_023322366.1  putative uncharacterized protein DDB_G0271606

    Related
    XP_023322366.1, XM_023466598.1
    Conserved Domains (3) summary
    cl17036
    Location:679 → 732
    SH3; Src Homology 3 domain superfamily
    cl17238
    Location:5 → 50
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
    cl28410
    Location:7 → 177
    RAD18; RING-finger-containing E3 ubiquitin ligase [Signal transduction mechanisms]
Nucleotide Protein
Heading Accession and Version

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