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LOC111682979 uncharacterized LOC111682979 [ Lucilia cuprina (Australian sheep blowfly) ]

Gene ID: 111682979, updated on 10-May-2024

Summary

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Gene symbol
LOC111682979
Gene description
uncharacterized LOC111682979
See related
EnsemblRapid:LOC111682979
Gene type
protein coding
RefSeq status
MODEL
Organism
Lucilia cuprina
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Oestroidea; Calliphoridae; Luciliinae; Lucilia
Orthologs
fruit fly all
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Genomic context

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See LOC111682979 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
101 current ASM2204524v1 (GCF_022045245.1) 3 NC_060951.1 (62515212..62517259, complement)
100 previous assembly Lcup_2.0 (GCF_000699065.1) Unplaced Scaffold NW_019410880.1 (238069..240077, complement)

Chromosome 3 - NC_060951.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111682965 Neighboring gene pseudouridine-metabolizing bifunctional protein C1861.05 Neighboring gene protein Notchless Neighboring gene COMM domain-containing protein 3 Neighboring gene ceramide glucosyltransferase Neighboring gene probable RNA-binding protein 19

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC111682979

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lucilia cuprina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2204524v1

Genomic

  1. NC_060951.1 Reference ASM2204524v1

    Range
    62515212..62517259 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023444982.2 → XP_023300750.1  uncharacterized protein LOC111682979 isoform X2

    Related
    XP_023300750.1, XM_023444982.2
    Conserved Domains (1) summary
    pfam10229
    Location:86 → 274
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  2. XM_023444981.2 → XP_023300749.1  uncharacterized protein LOC111682979 isoform X1

    UniProtKB/TrEMBL
    A0A0L0BXP1
    Related
    XP_023300749.1, XM_023444981.2
    Conserved Domains (1) summary
    pfam10229
    Location:89 → 277
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
Heading Accession and Version

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