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Hs6st heparan sulfate 6-O-sulfotransferase [ Lucilia cuprina (Australian sheep blowfly) ]

Gene ID: 111677583, updated on 22-May-2024

Summary

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Gene symbol
Hs6st
Gene description
heparan sulfate 6-O-sulfotransferase
See related
EnsemblRapid:LOC111677583
Gene type
protein coding
RefSeq status
MODEL
Organism
Lucilia cuprina
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Oestroidea; Calliphoridae; Luciliinae; Lucilia
Annotation information
Annotation category: partial on reference assembly
Orthologs
fruit fly all
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Genomic context

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See Hs6st in Genome Data Viewer
Location:
chromosome: 4
Exon count:
3
Annotation release Status Assembly Chr Location
101 current ASM2204524v1 (GCF_022045245.1) 4 NC_060952.1 (86885846..86887073, complement)
100 previous assembly Lcup_2.0 (GCF_000699065.1) Unplaced Scaffold NW_019410545.1 (156025..159582)

Chromosome 4 - NC_060952.1Genomic Context describing neighboring genes Neighboring gene Rab3 interacting molecule Neighboring gene collagen alpha-1(IX) chain-like Neighboring gene uncharacterized LOC111683356 Neighboring gene uncharacterized LOC111683358

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan-sulfate 6-O-sulfotransferase 3-B
Names
heparan-sulfate 6-O-sulfotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lucilia cuprina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2204524v1

Genomic

  1. NC_060952.1 Reference ASM2204524v1

    Range
    86885846..86887073 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023438735.2 → XP_023294503.2  heparan-sulfate 6-O-sulfotransferase 3-B

    Related
    XP_023294503.2, XM_023438735.2
Nucleotide Protein
Heading Accession and Version

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