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colt carnitine/acylcarnitine carrier protein colt, mitochondrial [ Lucilia cuprina (Australian sheep blowfly) ]

Gene ID: 111675281, updated on 16-May-2024

Summary

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Gene symbol
colt
Gene description
carnitine/acylcarnitine carrier protein colt, mitochondrial
See related
EnsemblRapid:LOC111675281
Gene type
protein coding
RefSeq status
MODEL
Organism
Lucilia cuprina
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Oestroidea; Calliphoridae; Luciliinae; Lucilia
Orthologs
fruit fly all
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Genomic context

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See colt in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
101 current ASM2204524v1 (GCF_022045245.1) 2 NC_060950.1 (70468698..70477294, complement)
100 previous assembly Lcup_2.0 (GCF_000699065.1) Unplaced Scaffold NW_019410447.1 (301114..308943)

Chromosome 2 - NC_060950.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S5a Neighboring gene small nucleolar RNA psi28S-1192 Neighboring gene meiosis regulator and mRNA stability factor 1-like protein Neighboring gene toll-like receptor 3 Neighboring gene uncharacterized LOC124421436 Neighboring gene peroxiredoxin-6 Neighboring gene acyl-CoA-binding domain-containing protein 5 Neighboring gene Interferon-related developmental regulator 1 Neighboring gene uncharacterized LOC111675285

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
congested-like trachea protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lucilia cuprina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2204524v1

Genomic

  1. NC_060950.1 Reference ASM2204524v1

    Range
    70468698..70477294 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046956614.1 → XP_046812570.1  congested-like trachea protein isoform X2

    Related
    XP_046812570.1, XM_046956614.1

  2. XM_023436019.2 → XP_023291787.1  congested-like trachea protein isoform X1

    UniProtKB/TrEMBL
    A0A0L0C2Z1
    Related
    XP_023291787.1, XM_023436019.2
    Conserved Domains (1) summary
    pfam00153
    Location:8 → 105
    Mito_carr; Mitochondrial carrier protein

  3. XM_046956615.1 → XP_046812571.1  congested-like trachea protein isoform X1

    UniProtKB/TrEMBL
    A0A0L0C2Z1
    Related
    XP_046812571.1, XM_046956615.1
Nucleotide Protein
Heading Accession and Version

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