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GlyS glycogen [starch] synthase [ Lucilia cuprina (Australian sheep blowfly) ]

Gene ID: 111674518, updated on 18-Sep-2024

Summary

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Gene symbol
GlyS
Gene description
glycogen [starch] synthase
See related
EnsemblRapid:LOC111674518
Gene type
protein coding
RefSeq status
MODEL
Organism
Lucilia cuprina
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Oestroidea; Calliphoridae; Luciliinae; Lucilia
Orthologs
fruit fly all
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Genomic context

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See GlyS in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM2204524v1 (GCF_022045245.1) 4 NC_060952.1 (101071583..101079041, complement)
100 previous assembly Lcup_2.0 (GCF_000699065.1) Unplaced Scaffold NW_019410422.1 (523160..530547)

Chromosome 4 - NC_060952.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111674523 Neighboring gene uncharacterized LOC111674519 Neighboring gene uncharacterized LOC111674508 Neighboring gene uncharacterized LOC111674495

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen [starch] synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Lucilia cuprina Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2204524v1

Genomic

  1. NC_060952.1 Reference ASM2204524v1

    Range
    101071583..101079041 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023435136.2 → XP_023290904.1  glycogen [starch] synthase isoform X2

    Related
    XP_023290904.1, XM_023435136.2
    Conserved Domains (1) summary
    pfam05693
    Location:33 → 677
    Glycogen_syn; Glycogen synthase

  2. XM_023435138.2 → XP_023290906.1  glycogen [starch] synthase isoform X2

    Related
    XP_023290906.1, XM_023435138.2
    Conserved Domains (1) summary
    pfam05693
    Location:33 → 677
    Glycogen_syn; Glycogen synthase

  3. XM_023435134.2 → XP_023290902.1  glycogen [starch] synthase isoform X1

    UniProtKB/TrEMBL
    A0A0L0CI26
    Related
    XP_023290902.1, XM_023435134.2
    Conserved Domains (1) summary
    pfam05693
    Location:56 → 700
    Glycogen_syn; Glycogen synthase
Nucleotide Protein
Heading Accession and Version

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