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si:dkey-150i13.2 mitochondrial carnitine/acylcarnitine carrier protein-like [ Seriola lalandi dorsalis ]

Gene ID: 111673371, updated on 15-Mar-2024

Summary

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Gene symbol
si:dkey-150i13.2
Gene description
mitochondrial carnitine/acylcarnitine carrier protein-like
See related
Ensembl:ENSSLDG00000008563
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola lalandi dorsalis (sub-species: dorsalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
zebrafish all
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Genomic context

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See si:dkey-150i13.2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Sedor1 (GCF_002814215.1) Unplaced Scaffold NW_019525469.1 (12046..20889, complement)

NW_019525469.1Genomic Context describing neighboring genes Neighboring gene tafazzin, phospholipid-lysophospholipid transacylase Neighboring gene mucin-5AC-like Neighboring gene 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase-like Neighboring gene necdin-like 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019525469 Unplaced Scaffold Reference Sedor1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola lalandi dorsalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sedor1 Primary Assembly

Genomic

  1. NW_019525469.1 Reference Sedor1 Primary Assembly

    Range
    12046..20889 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023431138.1 → XP_023286906.1  mitochondrial carnitine/acylcarnitine carrier protein-like isoform X2

    UniProtKB/TrEMBL
    A0A3B4X4F4
    Conserved Domains (1) summary
    pfam00153
    Location:105 → 197
    Mito_carr; Mitochondrial carrier protein

  2. XM_023431137.1 → XP_023286905.1  mitochondrial carnitine/acylcarnitine carrier protein-like isoform X1

    UniProtKB/TrEMBL
    A0A3B4X4F4
    Conserved Domains (1) summary
    pfam00153
    Location:105 → 197
    Mito_carr; Mitochondrial carrier protein

  3. XM_023431136.1 → XP_023286904.1  mitochondrial carnitine/acylcarnitine carrier protein-like isoform X1

    UniProtKB/TrEMBL
    A0A3B4X4F4
    Related
    ENSSLDP00000010910.1, ENSSLDT00000011309.1
    Conserved Domains (1) summary
    pfam00153
    Location:105 → 197
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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