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si:dkey-121b10.7 heparan sulfate glucosamine 3-O-sulfotransferase 6-like [ Seriola lalandi dorsalis ]

Gene ID: 111671982, updated on 15-Mar-2024

Summary

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Gene symbol
si:dkey-121b10.7
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 6-like
See related
Ensembl:ENSSLDG00000004959
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola lalandi dorsalis (sub-species: dorsalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
zebrafish all
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Genomic context

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See si:dkey-121b10.7 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Sedor1 (GCF_002814215.1) Unplaced Scaffold NW_019525444.1 (971069..991986)

NW_019525444.1Genomic Context describing neighboring genes Neighboring gene methionine-R-sulfoxide reductase B1-A-like Neighboring gene neuralized E3 ubiquitin protein ligase 2 Neighboring gene meiosis specific with OB-fold Neighboring gene MTOR associated protein, LST8 homolog (S. cerevisiae)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019525444 Unplaced Scaffold Reference Sedor1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola lalandi dorsalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sedor1 Primary Assembly

Genomic

  1. NW_019525444.1 Reference Sedor1 Primary Assembly

    Range
    971069..991986
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023429239.1 → XP_023285007.1  heparan sulfate glucosamine 3-O-sulfotransferase 6-like

    UniProtKB/TrEMBL
    A0A3B4WP94
    Related
    ENSSLDP00000006211.1, ENSSLDT00000006426.1
    Conserved Domains (1) summary
    pfam00685
    Location:113 → 349
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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