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LOC111661196 uncharacterized LOC111661196 [ Seriola lalandi dorsalis ]

Gene ID: 111661196, updated on 26-Jun-2024

Summary

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Gene symbol
LOC111661196
Gene description
uncharacterized LOC111661196
See related
Ensembl:ENSSLDG00000014227
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola lalandi dorsalis (sub-species: dorsalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
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Genomic context

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See LOC111661196 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
19
Annotation release Status Assembly Chr Location
100 current Sedor1 (GCF_002814215.1) Unplaced Scaffold NW_019525091.1 (280935..292118)

NW_019525091.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111661195 Neighboring gene uncharacterized LOC111661215 Neighboring gene C3a anaphylatoxin chemotactic receptor-like Neighboring gene myelin-associated glycoprotein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019525091 Unplaced Scaffold Reference Sedor1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell periphery IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cell septum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein LOC111661196

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola lalandi dorsalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sedor1 Primary Assembly

Genomic

  1. NW_019525091.1 Reference Sedor1 Primary Assembly

    Range
    280935..292118
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023414688.1 → XP_023270456.1  uncharacterized protein LOC111661196 isoform X1

    UniProtKB/TrEMBL
    A0A3B4XJ97
    Related
    ENSSLDP00000018069.1, ENSSLDT00000018684.1
    Conserved Domains (2) summary
    cd04190
    Location:147 → 477
    Chitin_synth_C; C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin
    COG1215
    Location:320 → 653
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]

  2. XM_023414689.1 → XP_023270457.1  uncharacterized protein LOC111661196 isoform X2

    UniProtKB/TrEMBL
    A0A3B4XJ97
    Conserved Domains (2) summary
    cd04190
    Location:147 → 477
    Chitin_synth_C; C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin
    COG1215
    Location:320 → 653
    BcsA; Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility]
Nucleotide Protein
Heading Accession and Version

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