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hs6st2 heparan sulfate 6-O-sulfotransferase 2 [ Seriola lalandi dorsalis ]

Gene ID: 111655820, updated on 15-Mar-2024

Summary

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Gene symbol
hs6st2
Gene description
heparan sulfate 6-O-sulfotransferase 2
See related
Ensembl:ENSSLDG00000016847
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola lalandi dorsalis (sub-species: dorsalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
zebrafish all
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Genomic context

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See hs6st2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Sedor1 (GCF_002814215.1) Unplaced Scaffold NW_019524886.1 (698987..701504)

NW_019524886.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein U-like protein 2 Neighboring gene nudix (nucleoside diphosphate linked moiety X)-type motif 22 Neighboring gene Transmembrane protein 179-like Neighboring gene transfer RNA phenylalanine (anticodon GAA) Neighboring gene muscleblind-like splicing regulator 3 Neighboring gene RAP2C, member of RAS oncogene family

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019524886 Unplaced Scaffold Reference Sedor1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan-sulfate 6-O-sulfotransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola lalandi dorsalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sedor1 Primary Assembly

Genomic

  1. NW_019524886.1 Reference Sedor1 Primary Assembly

    Range
    698987..701504
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023407348.1 → XP_023263116.1  heparan-sulfate 6-O-sulfotransferase 2-like

    UniProtKB/TrEMBL
    A0A3B4XT14
    Related
    ENSSLDP00000021565.1, ENSSLDT00000022276.1
    Conserved Domains (1) summary
    pfam03567
    Location:103 → 368
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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