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c1galt1c1 C1GALT1-specific chaperone 1 [ Seriola lalandi dorsalis ]

Gene ID: 111648273, updated on 15-Mar-2024

Summary

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Gene symbol
c1galt1c1
Gene description
C1GALT1-specific chaperone 1
See related
Ensembl:ENSSLDG00000002863
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola lalandi dorsalis (sub-species: dorsalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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See c1galt1c1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
100 current Sedor1 (GCF_002814215.1) Unplaced Scaffold NW_019525660.1 (3282046..3286267)

NW_019525660.1Genomic Context describing neighboring genes Neighboring gene protein eva-1 homolog C-like Neighboring gene chloride intracellular channel 2 Neighboring gene MCTS1 re-initiation and release factor Neighboring gene cullin 4B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019525660 Unplaced Scaffold Reference Sedor1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C1GALT1-specific chaperone 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola lalandi dorsalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sedor1 Primary Assembly

Genomic

  1. NW_019525660.1 Reference Sedor1 Primary Assembly

    Range
    3282046..3286267
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023398113.1 → XP_023253881.1  C1GALT1-specific chaperone 1

    UniProtKB/TrEMBL
    A0A3B4WQY9
    Related
    ENSSLDP00000003623.1, ENSSLDT00000003748.1
    Conserved Domains (1) summary
    cl21608
    Location:136 → 232
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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