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galnt9 polypeptide N-acetylgalactosaminyltransferase 9 [ Seriola lalandi dorsalis ]

Gene ID: 111644893, updated on 15-Mar-2024

Summary

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Gene symbol
galnt9
Gene description
polypeptide N-acetylgalactosaminyltransferase 9
See related
Ensembl:ENSSLDG00000018643
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola lalandi dorsalis (sub-species: dorsalis)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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See galnt9 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current Sedor1 (GCF_002814215.1) Unplaced Scaffold NW_019525496.1 (4060655..4145057, complement)

NW_019525496.1Genomic Context describing neighboring genes Neighboring gene 5-hydroxytryptamine (serotonin) receptor 7c Neighboring gene ATPase family AAA domain containing 1a Neighboring gene fibrosin-1-like protein Neighboring gene dynein, axonemal, heavy chain 5 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019525496 Unplaced Scaffold Reference Sedor1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola lalandi dorsalis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sedor1 Primary Assembly

Genomic

  1. NW_019525496.1 Reference Sedor1 Primary Assembly

    Range
    4060655..4145057 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023393857.1 → XP_023249625.1  polypeptide N-acetylgalactosaminyltransferase 9

    UniProtKB/TrEMBL
    A0A3B4Y3I6
    Related
    ENSSLDP00000023912.1, ENSSLDT00000024676.1
    Conserved Domains (2) summary
    cd02510
    Location:155 → 454
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:465 → 593
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
Nucleotide Protein
Heading Accession and Version

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