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LOC111639321 transmembrane and TPR repeat-containing protein CG4050-like [ Centruroides sculpturatus (bark scorpion) ]

Gene ID: 111639321, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111639321
Gene description
transmembrane and TPR repeat-containing protein CG4050-like
See related
EnsemblRapid:LOC111639321
Gene type
protein coding
RefSeq status
MODEL
Organism
Centruroides sculpturatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Scorpiones; Buthida; Buthoidea; Buthidae; Centruroides
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Genomic context

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See LOC111639321 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
100 current Cexi_2.0 (GCF_000671375.1) Unplaced Scaffold NW_019385475.1 (84824..174367, complement)

NW_019385475.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111639322

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019385475 Unplaced Scaffold Reference Cexi_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane and TPR repeat-containing protein CG4050-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Centruroides sculpturatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cexi_2.0

Genomic

  1. NW_019385475.1 Reference Cexi_2.0

    Range
    84824..174367 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023385178.1 → XP_023240946.1  transmembrane and TPR repeat-containing protein CG4050-like

    Related
    XP_023240946.1, XM_023385178.1
    Conserved Domains (3) summary
    sd00006
    Location:498 → 526
    TPR; TPR repeat [structural motif]
    pfam08409
    Location:260 → 329
    DUF1736; Domain of unknown function (DUF1736)
    cl26002
    Location:428 → 761
    TPR_11; TPR repeat
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases