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LOC111612401 delta-sarcoglycan-like [ Centruroides sculpturatus (bark scorpion) ]

Gene ID: 111612401, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111612401
Gene description
delta-sarcoglycan-like
See related
EnsemblRapid:LOC111612401
Gene type
protein coding
RefSeq status
MODEL
Organism
Centruroides sculpturatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Chelicerata; Arachnida; Scorpiones; Buthida; Buthoidea; Buthidae; Centruroides
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Genomic context

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See LOC111612401 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Cexi_2.0 (GCF_000671375.1) Unplaced Scaffold NW_019385885.1 (106233..134769)

NW_019385885.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111612396 Neighboring gene filamin-binding LIM protein 1-like Neighboring gene uncharacterized LOC111612397 Neighboring gene uncharacterized protein PF11_0213-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019385885 Unplaced Scaffold Reference Cexi_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
delta-sarcoglycan-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Centruroides sculpturatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cexi_2.0

Genomic

  1. NW_019385885.1 Reference Cexi_2.0

    Range
    106233..134769
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023353607.1 → XP_023209375.1  delta-sarcoglycan-like

    Related
    XP_023209375.1, XM_023353607.1
    Conserved Domains (1) summary
    pfam04790
    Location:45 → 297
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_023353608.1 → XP_023209376.1  delta-sarcoglycan-like

    Related
    XP_023209376.1, XM_023353608.1
    Conserved Domains (1) summary
    pfam04790
    Location:45 → 297
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  3. XM_023353609.1 → XP_023209377.1  delta-sarcoglycan-like

    Related
    XP_023209377.1, XM_023353609.1
    Conserved Domains (1) summary
    pfam04790
    Location:45 → 297
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases