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LOC111587603 protein-O-mannosyltransferase 1 [ Amphiprion ocellaris (clown anemonefish) ]

Gene ID: 111587603, updated on 18-Jun-2024

Summary

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Gene symbol
LOC111587603
Gene description
protein-O-mannosyltransferase 1
See related
Ensembl:ENSAOCG00000000287
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphiprion ocellaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
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Genomic context

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See LOC111587603 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2253959v1 (GCF_022539595.1) 6 NC_072771.1 (7595631..7607142, complement)
101 previous assembly AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019375615.1 (36080..47354, complement)

Chromosome 6 - NC_072771.1Genomic Context describing neighboring genes Neighboring gene caspase recruitment domain-containing protein 9-like Neighboring gene uncharacterized LOC129349044 Neighboring gene uncharacterized LOC129349043 Neighboring gene snRNA-activating protein complex subunit 4-like Neighboring gene patatin-like phospholipase domain containing 7b Neighboring gene mitochondrial ribosomal protein L41

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate-mannose-protein mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-mannosyl-transferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539595.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2253959v1 Primary Assembly

Genomic

  1. NC_072771.1 Reference ASM2253959v1 Primary Assembly

    Range
    7595631..7607142 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055011094.1 → XP_054867069.1  protein O-mannosyl-transferase 1 isoform X2

  2. XM_055011093.1 → XP_054867068.1  protein O-mannosyl-transferase 1 isoform X1

    Related
    ENSAOCP00000076599.1, ENSAOCT00000038533.1

  3. XM_055011095.1 → XP_054867070.1  protein O-mannosyl-transferase 1 isoform X3

Nucleotide Protein
Heading Accession and Version

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