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si:dkey-150i13.2 mitochondrial carnitine/acylcarnitine carrier protein [ Amphiprion ocellaris (clown anemonefish) ]

Gene ID: 111583552, updated on 18-Jun-2024

Summary

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Gene symbol
si:dkey-150i13.2
Gene description
mitochondrial carnitine/acylcarnitine carrier protein
See related
Ensembl:ENSAOCG00000012852
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphiprion ocellaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
Orthologs
zebrafish all
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Genomic context

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See si:dkey-150i13.2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2253959v1 (GCF_022539595.1) 8 NC_072773.1 (2009014..2020472, complement)
101 previous assembly AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019373937.1 (7607..19488, complement)

Chromosome 8 - NC_072773.1Genomic Context describing neighboring genes Neighboring gene ATPase H+ transporting accessory protein 1a Neighboring gene tafazzin, phospholipid-lysophospholipid transacylase Neighboring gene small nucleolar RNA SNORA11 Neighboring gene 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase Neighboring gene necdin-like 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539595.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2253959v1 Primary Assembly

Genomic

  1. NC_072773.1 Reference ASM2253959v1 Primary Assembly

    Range
    2009014..2020472 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035958350.2 → XP_035814243.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X2

    UniProtKB/TrEMBL
    A0A3Q1CHU9
    Conserved Domains (1) summary
    pfam00153
    Location:103 → 195
    Mito_carr; Mitochondrial carrier protein

  2. XM_023292698.3 → XP_023148466.1  mitochondrial carnitine/acylcarnitine carrier protein isoform X1

    UniProtKB/TrEMBL
    A0A3Q1CHU9
    Related
    ENSAOCP00000049696.1, ENSAOCT00000051103.1
    Conserved Domains (1) summary
    pfam00153
    Location:103 → 195
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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