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nsun6 NOP2/Sun RNA methyltransferase 6 [ Amphiprion ocellaris (clown anemonefish) ]

Gene ID: 111583299, updated on 18-Jun-2024

Summary

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Gene symbol
nsun6
Gene description
NOP2/Sun RNA methyltransferase 6
See related
Ensembl:ENSAOCG00000020920
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphiprion ocellaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
Orthologs
human zebrafish all
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Genomic context

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See nsun6 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2253959v1 (GCF_022539595.1) 22 NC_072787.1 (18602970..18613696)
101 previous assembly AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019373884.1 (9884..18898)

Chromosome 22 - NC_072787.1Genomic Context describing neighboring genes Neighboring gene MAF1 homolog, negative regulator of RNA polymerase III b Neighboring gene ADP-ribosylation factor-like 8 Neighboring gene calcium channel, voltage-dependent, beta 2a Neighboring gene uncharacterized LOC129347985 Neighboring gene zinc transporter ZIP12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tRNA (cytosine(72)-C(5))-methyltransferase NSUN6
Names
NOP2/Sun RNA methyltransferase family member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539595.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2253959v1 Primary Assembly

Genomic

  1. NC_072787.1 Reference ASM2253959v1 Primary Assembly

    Range
    18602970..18613696
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023292309.3 → XP_023148077.2  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 isoform X1

    Related
    ENSAOCP00000033487.1, ENSAOCT00000070217.1

  2. XM_023292311.3 → XP_023148079.2  tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 isoform X2

Nucleotide Protein
Heading Accession and Version

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