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zgc:101663 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C [ Amphiprion ocellaris (clown anemonefish) ]

Gene ID: 111582021, updated on 18-Jun-2024

Summary

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Gene symbol
zgc:101663
Gene description
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C
See related
Ensembl:ENSAOCG00000006179
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphiprion ocellaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
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Genomic context

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See zgc:101663 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2253959v1 (GCF_022539595.1) 8 NC_072773.1 (5110672..5128137, complement)
101 previous assembly AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019373626.1 (337939..352073)

Chromosome 8 - NC_072773.1Genomic Context describing neighboring genes Neighboring gene ATPase plasma membrane Ca2+ transporting 3b Neighboring gene cyclin Q Neighboring gene cilia and flagella associated protein 126 Neighboring gene adaptor related protein complex 4 subunit beta 1 Neighboring gene selenophosphate synthetase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539595.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2253959v1 Primary Assembly

Genomic

  1. NC_072773.1 Reference ASM2253959v1 Primary Assembly

    Range
    5110672..5128137 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023290485.3 → XP_023146253.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

    UniProtKB/TrEMBL
    A0A3Q1C2F7
    Conserved Domains (1) summary
    pfam04666
    Location:69 → 316
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region

  2. XM_023290484.3 → XP_023146252.1  alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C

    UniProtKB/TrEMBL
    A0A3Q1C2F7
    Related
    ENSAOCP00000002984.1, ENSAOCT00000010565.2
    Conserved Domains (1) summary
    pfam04666
    Location:69 → 316
    Glyco_transf_54; N-Acetylglucosaminyltransferase-IV (GnT-IV) conserved region
Nucleotide Protein
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