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lman2lb lectin, mannose-binding 2-like b [ Amphiprion ocellaris (clown anemonefish) ]

Gene ID: 111566000, updated on 19-Jun-2024

Summary

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Gene symbol
lman2lb
Gene description
lectin, mannose-binding 2-like b
See related
Ensembl:ENSAOCG00000032904
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphiprion ocellaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
Orthologs
zebrafish all
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Genomic context

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See lman2lb in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2253959v1 (GCF_022539595.1) 6 NC_072771.1 (6999784..7012117)
101 previous assembly AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019371788.1 (24939..33187)

Chromosome 6 - NC_072771.1Genomic Context describing neighboring genes Neighboring gene TM2 domain containing 2 Neighboring gene T-box transcription factor 3b Neighboring gene leukocyte surface antigen CD53-like Neighboring gene uncharacterized LOC129349091

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lectin, mannose-binding 2-like b
Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539595.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2253959v1 Primary Assembly

Genomic

  1. NC_072771.1 Reference ASM2253959v1 Primary Assembly

    Range
    6999784..7012117
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035946478.2 → XP_035802371.2  lectin, mannose-binding 2-like b isoform X1

    Related
    ENSAOCP00000070257.1, ENSAOCT00000036409.1

  2. XM_023266345.3 → XP_023122113.2  lectin, mannose-binding 2-like b isoform X2

    Related
    ENSAOCP00000069014.1, ENSAOCT00000065171.1
Nucleotide Protein
Heading Accession and Version

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