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lrrc41 leucine rich repeat containing 41 [ Amphiprion ocellaris (clown anemonefish) ]

Gene ID: 111564048, updated on 18-Jun-2024

Summary

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Gene symbol
lrrc41
Gene description
leucine rich repeat containing 41
See related
Ensembl:ENSAOCG00000017592
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphiprion ocellaris
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Amphiprion
Orthologs
human zebrafish all
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Genomic context

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See lrrc41 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_03 current ASM2253959v1 (GCF_022539595.1) 2 NC_072767.1 (11556116..11568854, complement)
101 previous assembly AmpOce1.0 (GCF_002776465.1) Unplaced Scaffold NW_019376131.1 (755437..768193, complement)

Chromosome 2 - NC_072767.1Genomic Context describing neighboring genes Neighboring gene RAD23 homolog A, nucleotide excision repair protein b Neighboring gene calreticulin 3a Neighboring gene Rho GTPase activating protein 39 Neighboring gene RAD54 like Neighboring gene neurturin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein lrrc41

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_022539595.1-RS_2023_03

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM2253959v1 Primary Assembly

Genomic

  1. NC_072767.1 Reference ASM2253959v1 Primary Assembly

    Range
    11556116..11568854 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035945014.2 → XP_035800907.1  uncharacterized protein lrrc41 isoform X3

    Related
    ENSAOCP00000055523.1, ENSAOCT00000040059.1
    Conserved Domains (2) summary
    sd00033
    Location:435 → 460
    LRR_RI; leucine-rich repeat [structural motif]
    cl39015
    Location:431 → 563
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

  2. XM_023263379.3 → XP_023119147.1  uncharacterized protein lrrc41 isoform X1

    Related
    ENSAOCP00000013054.2, ENSAOCT00000020968.2
    Conserved Domains (1) summary
    cl26161
    Location:433 → 619
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...

  3. XM_023263380.3 → XP_023119148.1  uncharacterized protein lrrc41 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1BK39
    Conserved Domains (1) summary
    cl26161
    Location:432 → 618
    LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
Nucleotide Protein
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