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CHAT choline O-acetyltransferase [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111554547, updated on 15-Mar-2024

Summary

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Gene symbol
CHAT
Gene description
choline O-acetyltransferase
See related
Ensembl:ENSPTEG00000020938
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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See CHAT in Genome Data Viewer
Location:
chromosome: 9
Exon count:
15
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 9 NC_045442.1 (85914522..85965155)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019317813.1 (442834..500403, complement)

Chromosome 9 - NC_045442.1Genomic Context describing neighboring genes Neighboring gene ERCC excision repair 6, chromatin remodeling factor Neighboring gene solute carrier family 18 member A3 Neighboring gene chromosome 9 C10orf53 homolog Neighboring gene oxoglutarate dehydrogenase L

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline O-acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in acetylcholine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuromuscular synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: choline O-acetyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045442.1 Reference ASM277652v3

    Range
    85914522..85965155
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031936239.1 → XP_031792099.1  LOW QUALITY PROTEIN: choline O-acetyltransferase

    UniProtKB/TrEMBL
    A0A8C9HDS4
    Conserved Domains (1) summary
    pfam00755
    Location:50 → 638
    Carn_acyltransf; Choline/Carnitine o-acyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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