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SLC11A1 solute carrier family 11 member 1 [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111548485, updated on 15-Mar-2024

Summary

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Gene symbol
SLC11A1
Gene description
solute carrier family 11 member 1
See related
Ensembl:ENSPTEG00000038729
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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See SLC11A1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
15
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 11 NC_045444.1 (104867263..104882548)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019316649.1 (28536857..28553189)

Chromosome 11 - NC_045444.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L19 pseudogene Neighboring gene U7 small nuclear RNA Neighboring gene ciliogenesis associated TTC17 interacting protein Neighboring gene translation initiation factor IF-2-like Neighboring gene CTD small phosphatase 1 Neighboring gene villin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadmium ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables manganese ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in metal ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
natural resistance-associated macrophage protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045444.1 Reference ASM277652v3

    Range
    104867263..104882548
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023220998.2 → XP_023076766.2  natural resistance-associated macrophage protein 1 isoform X1

    Conserved Domains (1) summary
    TIGR01197
    Location:83 → 483
    nramp; NRAMP (natural resistance-associated macrophage protein) metal ion transporters

  2. XM_026454726.1 → XP_026310511.1  natural resistance-associated macrophage protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C9JA47
    Related
    ENSPTEP00000042447.1, ENSPTET00000056585.1
    Conserved Domains (1) summary
    TIGR01197
    Location:53 → 453
    nramp; NRAMP (natural resistance-associated macrophage protein) metal ion transporters

  3. XM_023221008.2 → XP_023076776.2  natural resistance-associated macrophage protein 1 isoform X4

    Conserved Domains (1) summary
    TIGR01197
    Location:48 → 412
    nramp; NRAMP (natural resistance-associated macrophage protein) metal ion transporters

  4. XM_026454732.1 → XP_026310517.1  natural resistance-associated macrophage protein 1 isoform X7

    Conserved Domains (1) summary
    TIGR01197
    Location:83 → 415
    nramp; NRAMP (natural resistance-associated macrophage protein) metal ion transporters

  5. XM_026454729.1 → XP_026310514.1  natural resistance-associated macrophage protein 1 isoform X6

    Conserved Domains (1) summary
    TIGR01197
    Location:83 → 465
    nramp; NRAMP (natural resistance-associated macrophage protein) metal ion transporters

  6. XM_026454733.2 → XP_026310518.1  natural resistance-associated macrophage protein 1 isoform X8

    Conserved Domains (1) summary
    TIGR01197
    Location:83 → 421
    nramp; NRAMP (natural resistance-associated macrophage protein) metal ion transporters

  7. XM_026454728.1 → XP_026310513.1  natural resistance-associated macrophage protein 1 isoform X5

    Conserved Domains (1) summary
    TIGR01197
    Location:1 → 389
    nramp; NRAMP (natural resistance-associated macrophage protein) metal ion transporters

  8. XM_026454727.1 → XP_026310512.1  natural resistance-associated macrophage protein 1 isoform X3

    Conserved Domains (1) summary
    TIGR01197
    Location:14 → 414
    nramp; NRAMP (natural resistance-associated macrophage protein) metal ion transporters

RNA

  1. XR_003309543.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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