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HACD2 3-hydroxyacyl-CoA dehydratase 2 [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111544357, updated on 15-Mar-2024

Summary

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Gene symbol
HACD2
Gene description
3-hydroxyacyl-CoA dehydratase 2
See related
Ensembl:ENSPTEG00000015941
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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See HACD2 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 2 NC_045435.1 (39613591..39708415, complement)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019316638.1 (25013984..25108952, complement)

Chromosome 2 - NC_045435.1Genomic Context describing neighboring genes Neighboring gene SEC22 homolog A, vesicle trafficking protein Neighboring gene adenylate cyclase 5 Neighboring gene uncharacterized LOC111544353 Neighboring gene myosin light chain kinase Neighboring gene uncharacterized LOC111544411 Neighboring gene small nucleolar RNA SNORA5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyacyl-CoA dehydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sphingolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in very long-chain fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045435.1 Reference ASM277652v3

    Range
    39613591..39708415 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023214885.3 → XP_023070653.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C9HC14
    Related
    ENSPTEP00000014260.1
    Conserved Domains (1) summary
    pfam04387
    Location:85 → 245
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  2. XM_023214898.2 → XP_023070666.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C9H6R6
    Conserved Domains (1) summary
    pfam04387
    Location:5 → 152
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA

  3. XM_023214892.2 → XP_023070660.1  very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C9H6R6
    Related
    ENSPTEP00000014269.1, ENSPTET00000021408.1
    Conserved Domains (1) summary
    pfam04387
    Location:5 → 152
    PTPLA; Protein tyrosine phosphatase-like protein, PTPLA
Nucleotide Protein
Heading Accession and Version

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