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TCAP titin-cap [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111537469, updated on 15-Mar-2024

Summary

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Gene symbol
TCAP
Gene description
titin-cap
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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See TCAP in Genome Data Viewer
Location:
chromosome: 16
Exon count:
2
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 16 NC_045449.1 (48522426..48525302)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019317027.1 (3490535..3493441, complement)

Chromosome 16 - NC_045449.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 1B Neighboring gene StAR related lipid transfer domain containing 3 Neighboring gene uncharacterized LOC111537704 Neighboring gene phenylethanolamine N-methyltransferase Neighboring gene post-GPI attachment to proteins phospholipase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-macromolecule adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of muscle IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables titin Z domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables titin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cardiac muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cardiac muscle tissue morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cardiac myofibril assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in detection of muscle stretch IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sarcomerogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal muscle myosin thick filament assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in skeletal muscle thin filament assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Z disc IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
telethonin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045449.1 Reference ASM277652v3

    Range
    48522426..48525302
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023204263.3 → XP_023060031.1  telethonin

    Conserved Domains (1) summary
    pfam09470
    Location:17 → 167
    Telethonin; Telethonin protein
Nucleotide Protein
Heading Accession and Version

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