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DEGS1 delta 4-desaturase, sphingolipid 1 [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111537091, updated on 15-Mar-2024

Summary

Gene symbol
DEGS1
Gene description
delta 4-desaturase, sphingolipid 1
See related
Ensembl:ENSPTEG00000006274
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
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Genomic context

See DEGS1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 1 NC_045434.1 (80879200..80890207)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019316997.1 (4492393..4503573, complement)

Chromosome 1 - NC_045434.1Genomic Context describing neighboring genes Neighboring gene F-box protein 28 Neighboring gene small nucleolar RNA SNORA72 Neighboring gene uncharacterized LOC111536996 Neighboring gene nuclear VCP like Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sphingolipid delta-4 desaturase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
sphingolipid delta(4)-desaturase DES1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045434.1 Reference ASM277652v3

    Range
    80879200..80890207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023203663.1XP_023059431.1  sphingolipid delta(4)-desaturase DES1

    UniProtKB/TrEMBL
    A0A8C9GKC7
    Related
    ENSPTEP00000005413.1, ENSPTET00000008331.1
    Conserved Domains (2) summary
    cd03508
    Location:26315
    Delta4-sphingolipid-FADS-like; The Delta4-sphingolipid Fatty Acid Desaturase (Delta4-sphingolipid-FADS)-like CD includes the integral-membrane enzymes, dihydroceramide Delta-4 desaturase, involved in the synthesis of sphingosine; and the human membrane fatty acid (lipid) desaturase ...
    pfam08557
    Location:642
    Lipid_DES; Sphingolipid Delta4-desaturase (DES)