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CLEC14A C-type lectin domain containing 14A [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111524468, updated on 15-Mar-2024

Summary

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Gene symbol
CLEC14A
Gene description
C-type lectin domain containing 14A
See related
Ensembl:ENSPTEG00000006817
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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See CLEC14A in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 6 NC_045439.1 (68945246..68947682)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019318193.1 (3185699..3188135, complement)

Chromosome 6 - NC_045439.1Genomic Context describing neighboring genes Neighboring gene keratin, type II cytoskeletal 8 pseudogene Neighboring gene double homeobox protein B-like Neighboring gene peptidyl-prolyl cis-trans isomerase A pseudogene Neighboring gene somatostatin receptor 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables extracellular matrix protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-type lectin domain family 14 member A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045439.1 Reference ASM277652v3

    Range
    68945246..68947682
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023189655.1 → XP_023045423.1  C-type lectin domain family 14 member A

    UniProtKB/TrEMBL
    A0A8C9GLE8
    Related
    ENSPTEP00000005902.1, ENSPTET00000009072.1
    Conserved Domains (3) summary
    cd03600
    Location:33 → 175
    CLECT_thrombomodulin_like; C-type lectin-like domain (CTLD) of the type found in human thrombomodulin(TM), Endosialin, C14orf27, and C1qR
    pfam14670
    Location:255 → 287
    FXa_inhibition; Coagulation Factor Xa inhibitory site
    cl25495
    Location:300 → 438
    Endomucin
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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