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ZBTB44 zinc finger and BTB domain containing 44 [ Piliocolobus tephrosceles (Ugandan red Colobus) ]

Gene ID: 111522104, updated on 15-Mar-2024

Summary

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Gene symbol
ZBTB44
Gene description
zinc finger and BTB domain containing 44
See related
Ensembl:ENSPTEG00000000153
Gene type
protein coding
RefSeq status
MODEL
Organism
Piliocolobus tephrosceles
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Colobinae; Piliocolobus
Orthologs
human mouse all
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Genomic context

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See ZBTB44 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
11
Annotation release Status Assembly Chr Location
102 current ASM277652v3 (GCF_002776525.3) 13 NC_045446.1 (119200605..119278817, complement)
100 previous assembly ASM277652v1 (GCF_002776525.1) Unplaced Scaffold NW_019318104.1 (238316..316447, complement)

Chromosome 13 - NC_045446.1Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor like protein 2 Neighboring gene U4 spliceosomal RNA Neighboring gene ST14 transmembrane serine protease matriptase Neighboring gene uncharacterized LOC111522106 Neighboring gene ATP-dependent RNA helicase DDX18 pseudogene Neighboring gene small nucleolar RNA U3 Neighboring gene uncharacterized LOC116418419 Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 44

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Piliocolobus tephrosceles Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM277652v3

Genomic

  1. NC_045446.1 Reference ASM277652v3

    Range
    119200605..119278817 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031936680.1 → XP_031792540.1  zinc finger and BTB domain-containing protein 44 isoform X6

    Conserved Domains (5) summary
    COG5048
    Location:350 → 431
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:383 → 403
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam00096
    Location:381 → 403
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:395 → 420
    zf-H2C2_2; Zinc-finger double domain

  2. XM_031936681.1 → XP_031792541.1  zinc finger and BTB domain-containing protein 44 isoform X7

    Conserved Domains (2) summary
    sd00017
    Location:12 → 32
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:10 → 32
    zf-C2H2; Zinc finger, C2H2 type

  3. XM_023185878.3 → XP_023041646.1  zinc finger and BTB domain-containing protein 44 isoform X1

    Related
    ENSPTEP00000000104.1
    Conserved Domains (6) summary
    COG5048
    Location:383 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:489 → 511
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam00096
    Location:487 → 508
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain

  4. XM_023185881.2 → XP_023041649.1  zinc finger and BTB domain-containing protein 44 isoform X3

    Conserved Domains (5) summary
    COG5048
    Location:350 → 431
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:383 → 403
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:471 → 493
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:21 → 128
    BTB; BTB/POZ domain
    pfam13465
    Location:395 → 420
    zf-H2C2_2; Zinc-finger double domain

  5. XM_023185880.2 → XP_023041648.1  zinc finger and BTB domain-containing protein 44 isoform X2

    Conserved Domains (5) summary
    COG5048
    Location:351 → 432
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:384 → 404
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:472 → 494
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:21 → 128
    BTB; BTB/POZ domain
    pfam13465
    Location:396 → 421
    zf-H2C2_2; Zinc-finger double domain

  6. XM_023185883.1 → XP_023041651.1  zinc finger and BTB domain-containing protein 44 isoform X4

    UniProtKB/TrEMBL
    A0A8C9G815
    Related
    ENSPTEP00000000105.1, ENSPTET00000000181.1
    Conserved Domains (4) summary
    COG5048
    Location:383 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:21 → 128
    BTB; BTB/POZ domain
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain

  7. XM_023185882.3 → XP_023041650.1  zinc finger and BTB domain-containing protein 44 isoform X4

    UniProtKB/TrEMBL
    A0A8C9G815
    Conserved Domains (4) summary
    COG5048
    Location:383 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:21 → 128
    BTB; BTB/POZ domain
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain

  8. XM_023185884.2 → XP_023041652.1  zinc finger and BTB domain-containing protein 44 isoform X5

    Conserved Domains (4) summary
    COG5048
    Location:383 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:21 → 128
    BTB; BTB/POZ domain
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain

  9. XM_031936679.1 → XP_031792539.1  zinc finger and BTB domain-containing protein 44 isoform X1

    Conserved Domains (6) summary
    COG5048
    Location:383 → 449
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:401 → 421
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00020
    Location:489 → 511
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18228
    Location:15 → 130
    BTB_POZ_ZBTB44; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 44 (ZBTB44)
    pfam00096
    Location:487 → 508
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:413 → 438
    zf-H2C2_2; Zinc-finger double domain

RNA

  1. XR_002725160.3 RNA Sequence

  2. XR_002725161.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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