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LOC111510716 probable glutamine--tRNA ligase [ Leptinotarsa decemlineata (Colorado potato beetle) ]

Gene ID: 111510716, updated on 10-May-2024

Summary

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Gene symbol
LOC111510716
Gene description
probable glutamine--tRNA ligase
See related
EnsemblRapid:LOC111510716
Gene type
protein coding
RefSeq status
MODEL
Organism
Leptinotarsa decemlineata
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Chrysomeloidea; Chrysomelidae; Chrysomelinae; Doryphorini; Leptinotarsa
Orthologs
fruit fly all
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Genomic context

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See LOC111510716 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current Ldec_2.0 (GCF_000500325.1) Unplaced Scaffold NW_019289486.1 (359336..364170, complement)

NW_019289486.1Genomic Context describing neighboring genes Neighboring gene lysine-specific demethylase 8-like Neighboring gene B-cell receptor-associated protein 31 Neighboring gene uncharacterized LOC111510731 Neighboring gene uncharacterized LOC111510726 Neighboring gene cytochrome b-c1 complex subunit Rieske, mitochondrial-like Neighboring gene parkin coregulated gene protein homolog Neighboring gene tctex1 domain-containing protein 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019289486 Unplaced Scaffold Reference Ldec_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterizing Molecular Mechanisms of Imidacloprid Resistance in Select Populations of Leptinotarsa decemlineata in the Central Sands Region of Wisconsin. Clements J, et al. PLoS One, 2016. PMID 26821361, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutaminyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of aminoacyl-tRNA synthetase multienzyme complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable glutamine--tRNA ligase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Leptinotarsa decemlineata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Ldec_2.0

Genomic

  1. NW_019289486.1 Reference Ldec_2.0

    Range
    359336..364170 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023166659.1 → XP_023022427.1  probable glutamine--tRNA ligase

    Related
    XP_023022427.1, XM_023166659.1
    Conserved Domains (1) summary
    cl27212
    Location:1 → 619
    GlnS; Glutamyl- or glutaminyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases