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LOC111501402 endonuclease domain-containing 1 protein [ Maylandia zebra (zebra mbuna) ]

Gene ID: 111501402, updated on 21-Dec-2023

Summary

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Gene symbol
LOC111501402
Gene description
endonuclease domain-containing 1 protein
See related
Ensembl:ENSMZEG00005002566
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
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Genomic context

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See LOC111501402 in Genome Data Viewer
Location:
chromosome: LG2
Exon count:
3
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG2 NC_036781.1 (25644276..25650908, complement)

Linkage Group LG2 - NC_036781.1Genomic Context describing neighboring genes Neighboring gene macrophage migration inhibitory factor Neighboring gene zinc finger and SCAN domain-containing protein 29 Neighboring gene zinc-binding protein A33 Neighboring gene calcium binding protein 2b Neighboring gene beta-crystallin B1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_036781.1 Chromosome LG2 Reference M_zebra_UMD2a Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endonuclease domain-containing 1 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036781.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    25644276..25650908 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023154749.1 → XP_023010517.1  endonuclease domain-containing 1 protein

    UniProtKB/TrEMBL
    A0A3P9B068, A0A3P9B4U7
    Related
    ENSMZEP00005003296.1, ENSMZET00005003428.1
    Conserved Domains (1) summary
    smart00892
    Location:63 → 227
    Endonuclease_NS; DNA/RNA non-specific endonuclease
Nucleotide Protein
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Gene LinkOut

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