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LOC111481166 F-box protein GID2-like [ Cucurbita maxima (winter squash) ]

Gene ID: 111481166, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111481166
Gene description
F-box protein GID2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucurbita maxima
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Genomic context

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See LOC111481166 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
100 current Cmax_1.0 (GCF_002738345.1) Unplaced Scaffold NW_019272022.1 (5809464..5810690)

NW_019272022.1Genomic Context describing neighboring genes Neighboring gene putative cyclin-A3-1 Neighboring gene isoflavone 3'-hydroxylase-like Neighboring gene transcription factor MYB44-like Neighboring gene probable carbohydrate esterase At4g34215

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019272022 Unplaced Scaffold Reference Cmax_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of gibberellic acid mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of SCF ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box protein GID2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucurbita maxima Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cmax_1.0

Genomic

  1. NW_019272022.1 Reference Cmax_1.0

    Range
    5809464..5810690
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023126522.1 → XP_022982290.1  F-box protein GID2-like

    UniProtKB/TrEMBL
    A0A6J1J293
    Conserved Domains (1) summary
    pfam12937
    Location:49 → 86
    F-box-like
Nucleotide Protein
Heading Accession and Version

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