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LOC111472080 mediator of RNA polymerase II transcription subunit 23 [ Cucurbita maxima (winter squash) ]

Gene ID: 111472080, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111472080
Gene description
mediator of RNA polymerase II transcription subunit 23
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucurbita maxima
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Genomic context

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See LOC111472080 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
22
Annotation release Status Assembly Chr Location
100 current Cmax_1.0 (GCF_002738345.1) Unplaced Scaffold NW_019272080.1 (382030..405029, complement)

NW_019272080.1Genomic Context describing neighboring genes Neighboring gene bZIP transcription factor 17-like Neighboring gene plant UBX domain-containing protein 2-like Neighboring gene F-box protein SKIP28 Neighboring gene dynein light chain LC6, flagellar outer arm

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019272080 Unplaced Scaffold Reference Cmax_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 23

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucurbita maxima Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cmax_1.0

Genomic

  1. NW_019272080.1 Reference Cmax_1.0

    Range
    382030..405029 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023117778.1 → XP_022973546.1  mediator of RNA polymerase II transcription subunit 23

    UniProtKB/TrEMBL
    A0A6J1I8Y2
    Conserved Domains (1) summary
    pfam11573
    Location:697 → 1323
    Med23; Mediator complex subunit 23

RNA

  1. XR_002715330.1 RNA Sequence

Nucleotide Protein
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