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LOC111458055 alpha-1,4-glucan-protein synthase [UDP-forming] 2-like [ Cucurbita moschata (crookneck pumpkin) ]

Gene ID: 111458055, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111458055
Gene description
alpha-1,4-glucan-protein synthase [UDP-forming] 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucurbita moschata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Genomic context

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See LOC111458055 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268536.1 (3960724..3962576)

NW_019268536.1Genomic Context describing neighboring genes Neighboring gene Plant small nucleolar RNA R71 Neighboring gene uncharacterized LOC111457808 Neighboring gene transfer RNA isoleucine (anticodon AAU) Neighboring gene transfer RNA isoleucine (anticodon AAU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019268536 Unplaced Scaffold Reference Cmos_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,4-glucan-protein synthase [UDP-forming] 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cmos_1.0

Genomic

  1. NW_019268536.1 Reference Cmos_1.0

    Range
    3960724..3962576
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023100554.1 → XP_022956322.1  alpha-1,4-glucan-protein synthase [UDP-forming] 2-like

    UniProtKB/TrEMBL
    A0A6J1GW01
    Conserved Domains (1) summary
    PLN03180
    Location:4 → 348
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
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