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LOC111451616 callose synthase 5 [ Cucurbita moschata (crookneck pumpkin) ]

Gene ID: 111451616, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111451616
Gene description
callose synthase 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucurbita moschata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Genomic context

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See LOC111451616 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
43
Annotation release Status Assembly Chr Location
100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268529.1 (1450080..1465806)

NW_019268529.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111451874 Neighboring gene cation/H(+) antiporter 15-like Neighboring gene small nucleolar RNA J33 Neighboring gene uncharacterized LOC111451648 Neighboring gene protein trichome berefringence-like 7

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019268529 Unplaced Scaffold Reference Cmos_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
callose synthase 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cmos_1.0

Genomic

  1. NW_019268529.1 Reference Cmos_1.0

    Range
    1450080..1465806
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023092090.1 → XP_022947858.1  callose synthase 5

    UniProtKB/TrEMBL
    A0A6J1G7S2
    Conserved Domains (3) summary
    pfam02364
    Location:1036 → 1779
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:46 → 153
    Vta1; Vta1 like
    pfam14288
    Location:321 → 434
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
Heading Accession and Version

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