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LOC111449867 probable galacturonosyltransferase 4 [ Cucurbita moschata (crookneck pumpkin) ]

Gene ID: 111449867, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111449867
Gene description
probable galacturonosyltransferase 4
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucurbita moschata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Genomic context

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See LOC111449867 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268527.1 (168937..174008, complement)

NW_019268527.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein kinase D6PKL2-like Neighboring gene sodium/hydrogen exchanger 6-like Neighboring gene ras-related protein RABB1c Neighboring gene transfer RNA arginine (anticodon ACG)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019268527 Unplaced Scaffold Reference Cmos_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable galacturonosyltransferase 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cmos_1.0

Genomic

  1. NW_019268527.1 Reference Cmos_1.0

    Range
    168937..174008 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023089960.1 → XP_022945728.1  probable galacturonosyltransferase 4 isoform X2

    UniProtKB/TrEMBL
    A0A6J1G1Q5
    Conserved Domains (1) summary
    cl28622
    Location:1 → 646
    PLN02870; Probable galacturonosyltransferase

  2. XM_023089959.1 → XP_022945727.1  probable galacturonosyltransferase 4 isoform X1

    UniProtKB/TrEMBL
    A0A6J1G1Q9
    Conserved Domains (1) summary
    cl28622
    Location:1 → 650
    PLN02870; Probable galacturonosyltransferase
Nucleotide Protein
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