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LOC111447372 hydroxyproline O-galactosyltransferase GALT4-like [ Cucurbita moschata (crookneck pumpkin) ]

Gene ID: 111447372, updated on 22-Oct-2023

Summary

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Gene symbol
LOC111447372
Gene description
hydroxyproline O-galactosyltransferase GALT4-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Cucurbita moschata
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Genomic context

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See LOC111447372 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Cmos_1.0 (GCF_002738365.1) Unplaced Scaffold NW_019268525.1 (1655730..1658979)

NW_019268525.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111447374 Neighboring gene probable inactive leucine-rich repeat receptor kinase XIAO Neighboring gene glycerol-3-phosphate 2-O-acyltransferase 6-like Neighboring gene glutathione S-transferase U17-like Neighboring gene uncharacterized LOC111447905

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019268525 Unplaced Scaffold Reference Cmos_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyproline O-galactosyltransferase GALT4-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cucurbita moschata Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Cmos_1.0

Genomic

  1. NW_019268525.1 Reference Cmos_1.0

    Range
    1655730..1658979
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023086509.1 → XP_022942277.1  hydroxyproline O-galactosyltransferase GALT4-like

    UniProtKB/TrEMBL
    A0A6J1FPS5
    Conserved Domains (1) summary
    PLN03133
    Location:118 → 673
    PLN03133; beta-1,3-galactosyltransferase; Provisional
Nucleotide Protein
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